Browsing by Author "Laven R"

Now showing 1 - 19 of 19
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    An observational study of farmer-reported clinical mastitis in New Zealand dairy ewes.
    (Taylor and Francis Group, 2024-07-01) Chambers G; Laven R; Grinberg A; Ridler A; Velathanthiri N
    AIMS: To describe the incidence, aetiology, treatment, and outcomes of farmer-reported clinical mastitis on New Zealand dairy sheep farms. METHODS: A prospective cohort study was conducted on 20 spring-lambing New Zealand sheep milking farms over the 2022-2023 season. Clinical mastitis was defined as a change in the appearance of milk and/or signs of inflammation in the gland. Farmers were required to report all cases of clinical mastitis and collect information on affected ewes' demographics, clinical features, treatments (where applicable), and outcomes. Milk samples from mastitic glands were submitted for microbiological culture and identification by matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry (MALDI-TOF). RESULTS: Partial or complete clinical mastitis data were available for 236 cases from 221 ewes on 18/20 study farms. Clinical mastitis was diagnosed in 0-6% of ewes at the farm level, with an overall incidence of 1.8 (95% CI = 1.0-3.2)% using the study data, or 2.3 (95% CI = 1.6-3.3)% using the study data and farmer estimates that included unreported cases. Cases occurred mostly in early lactation, with 59% detected during the lambing period (August-October), at a median of 7 (IQR 3, 40) days in milk. The majority of cases featured clots in the milk (59%), swelling (55%), and unevenness (71%) of the glands. Pyrexia (rectal temperature ≥ 40.0°C) was diagnosed in 25% of cases and depression (lethargy, inappetence, or inability to stand) in 26% of cases. Treatment was given to 46% of cases, with tylosin being the most commonly used treatment (50% of treated cases). The most common outcome was immediate drying off to be culled without treatment (32%), followed by still milking and recovered but with lasting problems (25%). Nearly half of all the milk samples submitted were culture negative. Streptococcus uberis (14%), non-aureus staphylococci (12%), and Staphylococcus aureus (11%) were the most common isolates, found on 12, 8 and 8 of the 16 farms with microbiological data, respectively. CONCLUSIONS: Clinical mastitis affected up to 6% of ewes at the farm level. Systemic signs were observed in one quarter of affected ewes, suggesting a role for supportive treatment. Clinical mastitis can be severe and challenging to fully resolve in New Zealand dairy sheep. CLINICAL RELEVANCE: This is the first systematic study of clinical mastitis in New Zealand dairy ewes. It provides baseline information specific to New Zealand conditions for farmers, veterinarians, and other advisors to guide the management of mastitis for the relatively new dairy sheep industry in New Zealand.
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    Assessing Extensive Semi-Arid Rangeland Beef Cow-Calf Welfare in Namibia. Part 2: Categorisation and Scoring of Welfare Assessment Measures
    (MDPI (Basel, Switzerland), 2021-01-20) Kaurivi YB; Laven R; Hickson R; Parkinson T; Stafford K
    This paper aims to develop standards for a welfare assessment protocol by validating potential categorisation thresholds for assessing beef farms in various beef cow-calf production systems in Namibia. Forty measures, combined from a New Zealand-based protocol plus Namibia-specific measures, are applied to 55 beef farms (17 commercial farms, 20 semi-commercial and 18 communal village farms) during pregnancy testing, and a questionnaire guided interview. The categorised measures on a 3-point welfare score (0: good, 1: marginal, and 2: poor/unacceptable welfare) are subsequently compared with the derivation of thresholds based upon the poorest 15% and best 50% of herds for each measure. The overall combined thresholds of continuous measures across the three farm types show 10/22 measures that posed welfare compromise across Namibia, whereas commercial farms have 4/22 measures, and semi-commercial and communal village farms have 12/22 and 11/22, respectively, with high thresholds. Most measures-imposed thresholds are retained because of significant importance to the welfare of animals and preventiveness of the traits, while leniency was given to adjust good feeding and mortality measures to signify periods of drought. Handling measures (fearful, falling/lying) and abrasions thresholds are adjusted to reflect the temporary stress caused by infrequent cattle handling, and faulty yard designs/design and possible cattle breed influence on handling. Hence, Namibia needs prioritised investigation of underlying contributing factors and remediation to reduce the high thresholds.
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    Assessing Extensive Semi-Arid Rangeland Beef Cow-Calf Welfare in Namibia: Part 1: Comparison Between Farm Production System's Effect on the Welfare of Beef Cows
    (MDPI (Basel, Switzerland), 2021-01-12) Kaurivi YB; Laven R; Parkinson T; Hickson R; Stafford K
    A proposed animal welfare assessment protocol for semi-arid rangeland-based cow-calf systems in Namibia combined 40 measures from a protocol developed for beef cattle in New Zealand with additional Namibia-specific measures. Preliminary validation of the protocol had been undertaken with five herds in one semi-commercial village. The aim of the current study was to apply this protocol and compare animal welfare across three cow-calf production systems in Namibia. A total of 2529 beef cows were evaluated during pregnancy testing in the yards of 17 commercial, 20 semi-commercial, and 18 communal (total: 55) herds followed by an assessment of farm resources and a questionnaire-guided interview. Non-parametric tests were used to evaluate the difference in the welfare scores between the production systems. The results indicated a discrepancy of animal welfare between the three farm types, with a marked separation of commercial farms from semi-commercial, and communal village farms in the least. The differences in these production systems were mainly driven by economic gains through access to better beef export market for commercial farms and semi-commercial villages, as well as by the differences in the available grazing land, facility designs/quality, and traditional customs in the village systems. The results indicate an advantage of commercialization over communalization.
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    Assessment of Welfare in Transhumance Yak Hybrids (Chauris) in the Lower Himalayan Region of Nepal
    (MDPI (Basel, Switzerland), 2024-03-08) Sapkota S; Laven R; Barsila SR; Kells N; Mueller KR; Dhurba DC; Webster J; Leury BJ
    In order to develop a yak/chauri-specific welfare assessment protocol, we sent a set of 31 potential welfare measures to 120 Nepalese experts and asked them to identify the measures that they thought would be useful and propose additional useful measures. Eighty-three experts responded, with 13 measures being identified by >50% of respondents as likely to be useful. These thirteen measures plus one new measure (hematology) were included in an assessment protocol that was tested in the second phase of this study in five chauri herds in two districts in northern Nepal. Animal-based evaluations along with sampling for mastitis, intestinal parasites, and hematology were undertaken during or just after morning milking. Resource- and record-based measures were assessed through structured interviews, with verifications on-site where possible. No chauris exhibited poor body conditions, skin injuries, significant locomotion issues, or significant subclinical mastitis. Fecal testing suggested a high prevalence of intestinal parasites at the herd level, while blood testing suggested no evidence of hematological abnormalities. However, for both results, we need more data to use these effectively as measures of welfare. The resource-based assessment revealed significant challenges across all resources, and veterinary services were reported as being inadequate. A high estimated annual mortality rate (10–21%) needs further investigation. This protocol provided a useful start towards developing a welfare assessment protocol for yak/chauri and identified issues that need addressing to optimize chauri welfare.
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    Effect of Animal Welfare on the Reproductive Performance of Extensive Pasture-Based Beef Cows in New Zealand
    (MDPI (Basel, Switzerland), 2020-12-11) Kaurivi YB; Laven R; Parkinson T; Hickson R; Stafford K
    One key area where animal welfare may relate to productivity is through reproductive performance. This study assesses welfare on 25 extensively managed pastoral New Zealand beef farms, and explores the relationship between welfare and reproductive performance. Relationships between welfare measures and key reproductive performance indicators (pregnancy rate, weaning rate, mating period and bull: cow ratio) are investigated using an exploratory principal components analysis and linear regression model. Seven welfare measures (thinness, poor rumen fill, dirtiness, blindness, mortality, health checks of pregnant cows and yarding frequency/year) showed a potential influence on reproductive performance, and lameness was retained individually as a potential measure. Mean pregnancy rates, in both 2018 (PD18) and 2017 (PD17), were ~91% and mean weaning rate was 84%. Of the welfare measures, only lameness had a direct association with pregnancy rate, as well as a confounding effect on the association between mating period and pregnancy rate. The bull: cow ration (mean 1:31) and reproductive conditions (dystocia, abortion, vaginal prolapse) did not influence pregnancy and weaning rates. In the study population, there was no clear association between welfare and reproductive performance, except for the confounding effects of lameness.
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    Etiology and epidemiology of digital dermatitis in Australian dairy herds.
    (Elsevier B.V., 2024-02-06) McPherson A; Tranter B; Phipps A; Laven R; House J; Zadoks RN; Rowe S
    ABSTRACT Bovine digital dermatitis (BDD) is an important cause of lameness in dairy cows worldwide. However, there is very little known about this disease in Australian herds, which are predominantly managed on pasture. The primary objectives of this cross-sectional study were to describe the presence and prevalence of BDD in Australian dairy herds and to characterize the microbiota of healthy skin and M4 lesions of BDD-affected, pasture-managed cows. Cows from 71 dairy herds were examined at milking time to identify the presence of BDD lesions. True prevalence was estimated using Bayesian methods with informative priors for sensitivity and specificity. Biopsy samples (n = 60) were collected from cows with and without BDD-lesions in 7 pasture-based herds. The microbiota in the superficial and deep strata of each tissue biopsy were characterized via sequencing of the V3-V4 region of the bacterial ribosomal RNA gene. Lesions were detected in 1,817 (11.5%) of 15,813 cows, and in 68 of 71 (95.8%) herds. The median herd-level apparent and true prevalences of BDD were 8.5 and 18.1%, respectively, but this varied considerably between farms. On farms with BDD, M4 lesions accounted for 70 to 100% of all lesions (interquartile range = 95.1 to 100%, median = 100%). M2 lesions (i.e., large ulcerative lesions) were observed at low prevalence (<2.2%) in the few herds (7/71, 9.9%) where they were found. There was a statistically significant difference in the composition of the microbiota between healthy skin and M4 lesions but not between superficial and deep tissue layers. Several gut- and effluent-associated bacterial taxa, including Lentimicrobium and Porphyromonas, which have previously been associated with BDD, were abundant in BDD lesions but not in control biopsies. Our study supports the idea that such taxa are involved in, though possibly not essential to, lesion development and persistence in pasture-managed cows in Australia. Our results also suggest that Dichelobacter may contribute to the disease process. We conclude that BDD is likely to occur in most Australian dairy farms, but that further studies are needed to identify its impact on cow welfare and productivity. Further investigation of the etiology of BDD in Australian dairy herds is also necessary to inform prevention and control strategies. INTERPRETIVE SUMMARY: We visited 71 farms in Australia to estimate the prevalence of bovine digital dermatitis (an infectious skin disease that causes lameness in cows). Most farms (68 / 71) were identified to be endemic for the disease, but that the painful lesion types (score = M2) were uncommon. Microbiome analysis was conducted on 60 biopsy sample of cows with and without BDD lesions. We found that cows with BDD had higher abundances of gut- and effluent-associated bacterial taxa, including Lentimicrobium and Porphyromonas. We conclude that BDD is present on most Australian dairy farms.
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    Evaluating Alternatives to Locomotion Scoring for Lameness Detection in Pasture-Based Dairy Cows in New Zealand: Infra-Red Thermography
    (MDPI (Basel, Switzerland), 2021-12-06) Werema CW; Laven L; Mueller K; Laven R; Kofler J
    Lameness in cattle is a complex condition with huge impacts on welfare, and its detection is challenging for the dairy industry. The present study aimed to evaluate the association between foot skin temperature (FST) measured using infrared thermography (IRT) and locomotion scoring (LS) in dairy cattle kept at pasture. Data were collected from a 940-cow dairy farm in New Zealand. Cows were observed at two consecutive afternoon milkings where LS was undertaken at the first milking (4-point scale (0-3), DairyNZ). The next day, cows were thermally imaged from the plantar aspect of the hind feet using a handheld T650sc forward-looking infrared camera (IRT). The association between FST and locomotion score was analysed using a generalised linear model with an identity link function and robust estimators. ROC curves were performed to determine optimal threshold temperature cut-off values by maximising sensitivity and specificity for detecting locomotion score ≥ 2. There was a linear association between individual locomotion scores and FST. For mean temperature (MT), each one-unit locomotion score increase was associated with a 0.944 °C rise in MT. Using MT at a cut-off point of 34.5 °C produced a sensitivity of 80.0% and a specificity of 92.4% for identifying cows with a locomotion score ≥ 2 (lame). Thus, IRT has a substantial potential to be used on-farm for lameness detection. However, automation of the process will likely be necessary for IRT to be used without interfering with farm operations.
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    Incidence of Inadequate Transfer of Passive Immunity in Dairy Heifer Calves in South Australia
    (MDPI (Basel, Switzerland), 2022-10-24) Skirving R; Bottema CDK; Laven R; Hue DT; Petrovski KR; Beitz DC
    The objective of this observational study was to estimate the incidence of inadequate transfer of passive immunity (ITPI) on five pasture-based dairy farms in South Australia. Heifer calf uptake of colostrum was evaluated within the first 1−7 days of age (n = 2638) using a digital refractometer to estimate each calf’s serum total protein concentration, as an indicator of colostrum uptake. Results of <51 g/L indicated inadequate transfer of passive immunity (ITPI). The data showed that the incidence of ITPI on the farms was 6.5%, 31.3%, 48.8%, 49.7% and 52.4%. The incidence of ITPI was calculated in relation to the age of the calf at testing and the breed of calf, and no significant differences were found. A significant difference was found in the incidence of ITPI when comparing the calf’s first feed after separation from the dam (colostrum versus a colostrum-transition milk mixture). The farm with the lowest incidence of ITPI collected calves twice a day, measured colostrum quality on farm with a Brix refractometer and ensured that each calf received an appropriate amount of high-quality colostrum soon after collection. Further studies are required to establish the risk factors of ITPI in South Australian dairy heifers.
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    Longitudinal study of herd udder hygiene and its association with clinical mastitis in pasture-based dairy cows
    (Elsevier Inc and the Federation of Animal Science Societies (FASS) Inc on behalf of the American Dairy Science Association, 2021-05) Rowe S; Tranter W; Laven R
    The objectives of this exploratory study were to (1) describe the association between herd-level udder hygiene and clinical mastitis and (2) investigate how sample size and milking stage affect the accuracy and precision of herd udder hygiene assessments made at milking time. A prospective longitudinal study was conducted in a dairy herd in Northern Australia as part of a previously published clinical trial of premilking teat disinfection. Video footage from 35 afternoon milkings was used to conduct 12,544 udder hygiene scores from 504 cows during an 89-d period and measure udder hygiene of the herd (proportion of cows with udder hygiene ≥3 out of 4). Linear interpolation was used to estimate herd udder hygiene on the days that were not scored, such that a herd-level udder hygiene measure was available for all cow-days in the study. Clinical mastitis events occurring during the study period were detected and recorded by farm staff according to a standardized definition. The relationship between herd udder hygiene on each of 1, 2, and 3 d before each study day (d -1, -2, and -3, respectively) and clinical mastitis at the cow level on each study day (each in turn being set as d 0) was determined using multivariable generalized estimating equations (family = Poisson, link = log), with the unit of analysis being the cow-day, adjusting for potential confounders and the clustering within the data. In addition, sampling strategies were evaluated by simulating herd udder hygiene assessments using a subset of cows in the herd. Herd udder hygiene from d -1, -2, and -3 was positively associated with clinical mastitis on d 0 (incidence rate ratio = 1.4 per 10-point increase in the percentage of cows with poor udder hygiene). Sampling strategy simulation found that at least 80 cows needed to be scored to achieve sufficiently precise estimations of herd udder hygiene. Furthermore, cows scored later during milking were slightly more likely to have poor udder hygiene than those scored earlier (risk ratio = 1.02 for cows that were 10% later in the milking order). More research is needed to evaluate risk factors for poor udder hygiene and potential interventions in pasture-based dairy cows.
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    Measuring hoof horn haemorrhage in heifers: A history.
    (Elsevier B.V., 2024-06-27) Laven R; Laven L
    Understanding the aetiology and pathogenesis of claw-horn disease (CHD) is essential for developing prevention/treatment programmes. Haemorrhages in the hoof horn (i.e. white line/sole haemorrhages) are an important part of the pathogenesis of CHD, being precursors to and predictors of lesions such as white-line disease and sole ulcer. Understanding haemorrhage development can provide useful information about the aetiology and pathogenesis of CHD. The development of hoof horn haemorrhages is best studied in cattle without previous claw-horn damage, as previous history of damage can markedly alter the hoof's response to stressors. Since the early 1990s, many prospective studies of the risk factors associated with CHD have been undertaken in late pregnant and early lactation heifers, which have a low risk of having had CHD but which are exposed to the same risk factors as lactating cows. Those studies have used a range of methods to assess hoof horn haemorrhages, with the principal focus, particularly initially (but also more recently), being on measuring lesion severity. However, as the science developed it became clear that measuring lesion extent was also important and that combining severity and extent in a single measure was the best approach to assess hoof horn haemorrhages. Studies of hoof horn haemorrhage in heifers have significantly increased our understanding of CHD, demonstrating the importance of housing and the relative lack of importance of post-calving nutrition. Most importantly, they have shown the importance of parturition as a risk factor for CHD, and how parturition interacts with other risk factors to accentuate their effect. The use of such studies has decreased in recent years, despite recent research showing that we still have much to learn from prospective studies of hoof horn haemorrhages in heifers.
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    Possible Consequences of Climate Change on Survival, Productivity and Reproductive Performance, and Welfare of Himalayan Yak (Bos grunniens)
    (MDPI (Basel, Switzerland), 2022-08-22) Sapkota S; Acharya KP; Laven R; Acharya N; Turzillo AM
    Yak are adapted to the extreme cold, low oxygen, and high solar radiation of the Himalaya. Traditionally, they are kept at high altitude pastures during summer, moving lower in the winter. This system is highly susceptible to climate change, which has increased ambient temperatures, altered rainfall patterns and increased the occurrence of natural disasters. Changes in temperature and precipitation reduced the yield and productivity of alpine pastures, principally because the native plant species are being replaced by less useful shrubs and weeds. The impact of climate change on yak is likely to be mediated through heat stress, increased contact with other species, especially domestic cattle, and alterations in feed availability. Yak have a very low temperature humidity index (52 vs. 72 for cattle) and a narrow thermoneutral range (5-13 °C), so climate change has potentially exposed yak to heat stress in summer and winter. Heat stress is likely to affect both reproductive performance and milk production, but we lack the data to quantify such effects. Increased contact with other species, especially domestic cattle, is likely to increase disease risk. This is likely to be exacerbated by other climate-change-associated factors, such as increases in vector-borne disease, because of increases in vector ranges, and overcrowding associated with reduced pasture availability. However, lack of baseline yak disease data means it is difficult to quantify these changes in disease risk and the few papers claiming to have identified such increases do not provide robust evidence of increased diseases. The reduction in feed availability in traditional pastures may be thought to be the most obvious impact of climate change on yak; however, it is clear that such a reduction is not solely due to climate change, with socio-economic factors likely being more important. This review has highlighted the large potential negative impact of climate change on yak, and the lack of data quantifying that impact. More research on the impact of climate change in yak is needed. Attention also needs to be paid to developing mitigating strategies, which may include changes in the traditional system such as providing shelter and supplementary feed and, in marginal areas, increased use of yak-cattle hybrids.
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    Practicability of a Time-Limited Welfare Assessment Protocol for Pasture-Based Dairy Farms, and a Preliminary Assessment of Welfare Outcome Thresholds
    (MDPI (Basel, Switzerland), 2022-09-19) Sapkota S; Laven R; Müller KR; Kells N; Bernabucci U
    This study assessed a new time-limited protocol developed for pasture-based cows across 23 dairy farms. The process started prior to milking with a questionnaire, followed by an assessment of resources (16 farms only) and behavioural observation of cows at pasture. Remaining animal-based measures were assessed during milking, usually by two assessors (one parlour based and one outside). The protocol proved to be practical and feasible with limited changes needed, except for the assessment of water availability and behaviour. As most cows could access only one water trough, distance between troughs was not a measure of water availability, while the observation of a large numbers of cows at pasture for 30 min resulted in few observations and an uncertain denominator (effective number of observed cows). Further research is needed to determine the best way of assessing water availability and cow behaviour in a time-limited assessment of pasture-based cows. Three animal-based measures (broken tails, dirtiness, and coughing) had mean values higher than the author-determined acceptable thresholds, while <50% of farms met trough cleanliness and track condition targets, and none met the criteria for shelter and shade. This was a sample of farms based on convenience, so more data are required to establish the representativeness of these results. Such testing should involve assessment of the repeatability and reliability of the measures in our protocol.
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    Prevalence and genetic diversity of Theileria equi from horses in Xinjiang Uygur Autonomous region, China.
    (Elsevier B.V., 2023-07-01) Zhang Y; Shi Q; Laven R; Li C; He W; Zheng H; Liu S; Lu M; Yang DA; Guo Q; Chahan B
    Theileria equi is a tick-borne intracellular apicomplexan protozoan parasite that causes equine theileriosis (ET). ET is an economically important disease with a worldwide distribution that significantly impacts international horse movement. Horses are an essential part of the economy in Xinjiang which is home to ∼10% of all the horses in China. However, there is very limited information on the prevalence and genetic complexity of T. equi in this region. Blood samples from 302 horses were collected from May to September 2021 in Ili, Xinjiang, and subjected to PCR examination for the presence of T. equi. In addition, a Bayesian latent class model was employed to estimate the true prevalence of T. equi, and a phylogenetic analysis was carried out based on the 18S rRNA gene of T. equi isolates. Seventy-two horses (23.8%) were PCR positive. After accounting for the imperfect PCR test using a Bayesian latent class model, the estimated true prevalence differed considerably between age groups, being 10.8% (95%CrI: 5.8% - 17.9%) in ≤ 3-year-old horses and 35.7% (95%CrI: 28.1% - 44.5%) in horses that were > 3 year-old. All T. equi isolates had their 18S rRNA gene (430bp) sequenced and analyzed in order to identify whether there were multiple genotypes of T. equi in the Xinjiang horse population. All of the 18S rRNA genes clustered into one phylogenetic group, clade E, which is thus probably the dominant genotype of T. equi in Xinjiang, China. To summarize, we monitored the prevalence of T. equi in horses of Xinjiang, China, with a focus on the association between age and the occurrence of T. equi by Bayesian modelling, accompanied by the genotyping of T. equi isolates. Obtaining the information on genotypes and age structure is significant in monitoring the spread of T. equi and studying the factors responsible for the distribution.
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    Risk Factors Associated With Mastitis in Smallholder Dairy Farms in Southeast Brazil
    (MDPI (Basel, Switzerland), 2021-07-14) Silva AC; Laven R; Benites NR; Persson Y; Rahman MM
    The aim of this study was to investigate the potential risk factors for clinical and subclinical mastitis in smallholder dairy farms in Brazil. A prospective, repeated cross-sectional study was carried out between May 2018 and June 2019 on 10 smallholder dairy farms. Potential risk factors for subclinical and clinical mastitis at the herd and cow level were recorded through interviewing the owner and by observation. A combination of clinical udder examination and the Tamis (screened mug with a dark base) test (Tadabras Indústria e Comércio de Produtos Agrovetereinário LTDA, Bragrança Paulista, SP, Brazil) were applied to observe clinical mastitis, and the California Mastitis Test (Tadabras Indústria e Comércio de Produtos Agrovetereinário LTDA, Bragrança Paulista, SP, Brazil) was used to determine subclinical mastitis. A total of 4567 quarters were tested, 107 (2.3%) had clinical mastitis, while 1519 (33.2%) had subclinical mastitis. At the cow level, clinical mastitis risk was highest in mid-lactation (50-150 days in milk) with OR 2.62 with 95% confidence interval (CI) of 1.03-6.67, while subclinical mastitis was highest in late lactation (> 150 days in milk) with OR 2.74 (95% CI 2.05-3.63) and lower in primiparous (OR 0.54, 95% CI 0.41-0.71) than multiparous cows. At the herd level, using dry-cow treatment (OR 4.23, 95% CI 1.42-12.62) was associated with an increased risk of clinical mastitis. Milking clinical (OR 0.37, 95% CI 0.24-0.56) and subclinical cases last (OR 0.21, 95% CI 0.09-0.47) and cleaning the milking parlor regularly (OR 0.27, 95% CI 0.15-0.46) had decreased odds for subclinical mastitis, while herds with optimized feed had greater odds (OR 9.11, 95% CI 2.59-31.9). Prevalence of clinical mastitis was at its lowest at the first visit in June/July and highest at the last visit in April/June (OR 3.81, 95% CI 1.93-7.52). Subclinical mastitis also presented increased odds in the last visit (OR 2.62, 95% CI 2.0-3.36). This study has identified some risk factors for mastitis on smallholder farms but further research on more farms across more areas of Brazil is required to develop a targeted mastitis control program for smallholder farms.
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    Rule Discovery in Milk Content towards Mastitis Diagnosis: Dealing with Farm Heterogeneity over Multiple Years through Classification Based on Associations
    (MDPI (Basel, Switzerland), 2021-06-01) Ebrahimie E; Mohammadi-Dehcheshmeh M; Laven R; Petrovski KR; Alfson KJ; Clemmons EA; Dutton III JW
    Subclinical mastitis, an economically challenging disease of dairy cattle, is associated with an increased use of antimicrobials which reduces milk quantity and quality. It is more common than clinical mastitis and far more difficult to detect. Recently, much attention has been paid to the development of machine-learning expert systems for early detection of subclinical mastitis from milking features. However, differences between animals within a farm as well as between farms, particularly across multiple years, are major obstacles to the generalisation of machine learning models. Here, for the first time, we integrated scaling by quartiling with classification based on associations in a multi-year study to deal with farm heterogeneity by discovery of multiple patterns towards mastitis. The data were obtained from one farm comprising Holstein Friesian cows in Ongaonga, New Zealand, using an electronic automated monitoring system. The data collection was repeated annually over 3 consecutive years. Some discovered rules, such as when the milking peak flow is low, electrical conductivity (EC) of milk is low, milk lactose is low, milk fat is high, and milk volume is low, the cow has subclinical mastitis, reached high confidence (>70%) in multiple years. On averages, over 3 years, low level of milk lactose and high value of milk EC were part of 93% and 83.8% of all subclinical mastitis detecting rules, offering a reproducible pattern of subclinical mastitis detection. The scaled year-independent combinational rules provide an easy-to-apply and cost-effective machine-learning expert system for early detection of hidden mastitis using milking parameters.
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    The effect of scrotal circumference on pregnancy rates in Mpwapwa breed cattle during September – November 2020 breeding season at Taliri Mpwapwa farm in Tanzania
    (Nexus Academic Publishers (NAP), 2021-09-15) Kabuni KT; Laven R
    The goal of this study was to assess the effect of scrotal circumference (SC) on conception rates in Mpwapwa breed cattle during the Sept – Nov 2020 breeding season. Eight Mpwapwa bulls aged ≥3 years were selected from 23 bulls which had passed a structural soundness and movement tests based on having the largest SC and used to mate 324 non-pregnant Mpwapwa cows. Mating was conducted in eight groups with each group randomly assigned a single bull. For each bull, data were collected on age, pre-breeding body condition score (BCS) and body weight, SC and total number of cows bred. Based on p<0.25 value in a univariable model with pregnancy rate as the outcome variable, all of the variables except bodyweight were included in a multivariable logistic regression model with pregnancy rate as the outcome variable. Of those variables only pre-breeding BCS was clearly associated with odds of pregnancy. Compared to a bull with a BCS of 3.5, a bull with a BCS of 3.0 had only 0.29 times the odds (95% confidence interval (CI) 0.15 to 0.57) of getting a cow pregnant during the breeding season. For SC, the data were compatible with a small decrease and a moderate increase in the odds of pregnancy (odds ratio for a 1 cm increase in SC was 1.05 (95%CI 0.84 to 1.3)). Further research on the association between SC and pregnancy rate in Mpwapwa bulls is needed, including identifying whether there is an interaction between BCS and SC and their effect on subsequent fertility.
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    The Influence of Rotational Length, along with Pre- and Post-Grazing Measures on Nutritional Composition of Pasture during Winter and Spring on New Zealand Dairy Farms
    (MDPI (Basel, Switzerland), 2022-08) Kumara SN; Parkinson TJ; Laven R; Donaghy DJ
    The quality of ryegrass−clover pasture was investigated between August (winter: start of calving) and November (spring: end of breeding) on pasture-based dairy farms (>85% of total feed from pasture) that had short (n = 2, Farms A and B; winter ~30 days, spring ~20−25 days) or long (n = 2, Farms C and D; winter ~35 days, spring ~25−30 days) grazing rotations to determine whether quality was affected by grazing rotation length (RT). Weekly assessments of pasture growth and herbage quality were made using a standardised electronic rising plate meter, and near-infrared spectroscopy, respectively. Data were subjected to repeated measure mixed model analysis, in which herbage quality was the outcome variable. The highest pre-grazing dry matter (PGDM) and height, post-grazing dry matter (DM) and height, and number of live leaves per tiller (leaf regrowth stage, LS) were present in late spring. Neutral detergent fibre (NDF), acid detergent fibre (ADF), metabolisable energy (ME), and organic matter digestibility (OMD) were positively correlated to each other (r2 ≥ 0.8) whilst ADF and lipid, and ADF and OMD were negatively correlated (r2 ≥ −0.8; p < 0.01). Metabolisable energy content was negatively correlated with ADF and NDF (r2 = −0.7, −0.8, respectively), and was inversely related to PGDM. Metabolisable energy was higher (p < 0.05) in farms with shorter (overall mean: 11.2 MJ/kg DM) than longer (10.9 MJ/kg DM) RT. Crude protein was also inversely related to PGDM and was higher with shorter (23.2% DM) than longer (18.3% DM; p < 0.05) RT. Pre-grazing DM affected the amount of pasture that was grazed and, hence, the amount of DM remaining after grazing (post-grazing DM or residual), so that PGDM was correlated with post-grazing height and residual DM (r2 = 0.88 and 0.51, respectively; both p < 0.001). In conclusion, RT, LS, and PGDM during winter and spring influenced the herbage quality, therefore, better management of pastures may enhance the productivity of dairy cows.